Month: Mar 2019

Going from a list of accession numbers to a formatted latex table

I just want to highlight two packages in R that really do something useful. mygene (https://bioconductor.org/packages/release/bioc/html/mygene.html) takes a list of accession numbers and gets back genbank records. This is something I'm always doing. There are probably lots of good ways of doing this. xtable (https://cran.r-project.org/web/packages/xtable/index.html) is a bit more unique. It can take an R … Continue reading Going from a list of accession numbers to a formatted latex table →

RNA extraction – Trizol protocol

EDIT: no sooner do I publish this than I discover that there is actually a kit that combines Trizol extraction and the PureLink columns. We've got a couple of these Trizol protocols hanging around the lab, just thought it might be a good idea to save them here for posterity. Trizol extraction is good for … Continue reading RNA extraction – Trizol protocol →